ostree os layering hardlink error

May 26 14:42:38 ykipsec-ctlplane-0.karmalabs.corp machine-config-daemon[2855]: Fetched ostree chunk sha256:b959521096c0
May 26 14:42:38 ykipsec-ctlplane-0.karmalabs.corp machine-config-daemon[2855]: Fetching layer sha256:4f0cee3d64ad (256.6 MB)
May 26 14:42:43 ykipsec-ctlplane-0.karmalabs.corp rpm-ostree[2778]: Txn Rebase on /org/projectatomic/rpmostree1/rhcos failed: Parsing layer blob sha256:4f0cee3d64ad4798c0e687dcf5258e2929147bbe77b50ed6a1dc8d0c9c8587c5: Failed to commit tar: ExitStatus(unix_wait_status(256)): error: ostree-tar: Processing deferred hardlink sysroot/ostree/repo/objects/d6/1505b4bf1819b8067d54051f46da5682842368121851a4e9390b5e9153340c.file: Failed to find object: No such file or directory: sysroot
May 26 14:42:43 ykipsec-ctlplane-0.karmalabs.corp rpm-ostree[2778]: Unlocked sysroot
May 26 14:42:43 ykipsec-ctlplane-0.karmalabs.corp rpm-ostree[2778]: Process [pid: 2855 uid: 0 unit: machine-config-daemon-firstboot.service] disconnected from transaction progress
May 26 14:42:43 ykipsec-ctlplane-0.karmalabs.corp rpm-ostree[2778]: client(id:cli dbus:1.41 unit:machine-config-daemon-firstboot.service uid:0) vanished; remaining=0
May 26 14:42:43 ykipsec-ctlplane-0.karmalabs.corp rpm-ostree[2778]: In idle state; will auto-exit in 64 seconds
May 26 14:42:44 ykipsec-ctlplane-0.karmalabs.corp machine-config-daemon[2713]: I0526 14:42:44.116895    2713 update.go:1244] Updating files
May 26 14:42:44 ykipsec-ctlplane-0.karmalabs.corp machine-config-daemon[2713]: I0526 14:42:44.116940    2713 update.go:1310] Deleting stale data
May 26 14:42:44 ykipsec-ctlplane-0.karmalabs.corp machine-config-daemon[2713]: I0526 14:42:44.116947    2713 update.go:2148] Removing SIGTERM protection
May 26 14:42:44 ykipsec-ctlplane-0.karmalabs.corp machine-config-daemon[2713]: W0526 14:42:44.116962    2713 firstboot_complete_machineconfig.go:46] error: failed to update OS to quay.io/ykashtan/coreos-9:libreswan : error running rpm-ostree rebase --experimental ostree-unverified-registry:quay.io/ykashtan/coreos-9:libreswan: error: Parsing layer blob sha256:4f0cee3d64ad4798c0e687dcf5258e2929147bbe77b50ed6a1dc8d0c9c8587c5: Failed to commit tar: ExitStatus(unix_wait_status(256)): error: ostree-tar: Processing deferred hardlink sysroot/ostree/repo/objects/d6/1505b4bf1819b8067d54051f46da5682842368121851a4e9390b5e9153340c.file: Failed to find object: No such file or directory: sysroot

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works well on 4.14
afaik it is related to https://github.com/ostreedev/ostree-rs-ext/pull/408