JBDS-2955 is fixed but now there are new errors:

Still a (non-fatal) bug in beta3.respin-a:

[ldimaggi@ldimaggi .metadata]$ more .log
!SESSION 2014-07-18 14:41:55.380 -----------------------------------------------
eclipse.buildId=unknown
java.version=1.7.0_51
java.vendor=Oracle Corporation
BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=en_US
Framework arguments: -product com.jboss.devstudio.core.product
Command-line arguments: -os linux -ws gtk -arch x86_64 -product com.jboss.devstudio.core.product

!ENTRY org.eclipse.help.base 4 0 2014-07-18 14:43:03.690
!MESSAGE An error occured while pre-processing help XHTML document "/org.eclipse.datatools.sqltools.doc.user/doc/html/asc1229700
427574.html" for search indexing
!STACK 0
org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; JAXP00010001: The parser has encountered more than "64000" entity
expansions in this document; this is the limit imposed by the JDK.
at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:257)
at com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:347)
at org.eclipse.help.internal.dynamic.DocumentReader.read(DocumentReader.java:56)
at org.eclipse.help.internal.dynamic.XMLProcessor.process(XMLProcessor.java:49)
at org.eclipse.help.internal.xhtml.DynamicXHTMLProcessor.process(DynamicXHTMLProcessor.java:76)
at org.eclipse.help.internal.search.XHTMLSearchParticipant.preprocess(XHTMLSearchParticipant.java:106)
at org.eclipse.help.search.SearchParticipantXML.addDocument(SearchParticipantXML.java:297)
at org.eclipse.help.internal.search.HTMLSearchParticipant.addDocument(HTMLSearchParticipant.java:52)
at org.eclipse.help.internal.search.SearchIndex.addDocument(SearchIndex.java:231)
at org.eclipse.help.internal.search.IndexingOperation.addDocuments(IndexingOperation.java:252)
at org.eclipse.help.internal.search.IndexingOperation.addNewDocuments(IndexingOperation.java:159)
at org.eclipse.help.internal.search.IndexingOperation.execute(IndexingOperation.java:106)
at org.eclipse.help.internal.search.LocalSearchManager.updateIndex(LocalSearchManager.java:628)
at org.eclipse.help.internal.search.LocalSearchManager.ensureIndexUpdated(LocalSearchManager.java:602)
at org.eclipse.help.internal.search.federated.IndexerJob.run(IndexerJob.java:31)
at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)

!ENTRY org.eclipse.help.base 4 0 2014-07-18 14:43:04.545
!MESSAGE An error occured while pre-processing help XHTML document "/org.eclipse.jpt.doc.user/ref_details_orm.htm" for search in
dexing
!STACK 0
org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; JAXP00010001: The parser has encountered more than "64000" entity
expansions in this document; this is the limit imposed by the JDK.
at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:257)
at com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:347)
at org.eclipse.help.internal.dynamic.DocumentReader.read(DocumentReader.java:56)
at org.eclipse.help.internal.dynamic.XMLProcessor.process(XMLProcessor.java:49)
at org.eclipse.help.internal.xhtml.DynamicXHTMLProcessor.process(DynamicXHTMLProcessor.java:76)
at org.eclipse.help.internal.search.XHTMLSearchParticipant.preprocess(XHTMLSearchParticipant.java:106)
at org.eclipse.help.search.SearchParticipantXML.addDocument(SearchParticipantXML.java:297)
at org.eclipse.help.internal.search.HTMLSearchParticipant.addDocument(HTMLSearchParticipant.java:52)
at org.eclipse.help.internal.search.SearchIndex.addDocument(SearchIndex.java:231)
at org.eclipse.help.internal.search.IndexingOperation.addDocuments(IndexingOperation.java:252)
at org.eclipse.help.internal.search.IndexingOperation.addNewDocuments(IndexingOperation.java:159)
at org.eclipse.help.internal.search.IndexingOperation.execute(IndexingOperation.java:106)
at org.eclipse.help.internal.search.LocalSearchManager.updateIndex(LocalSearchManager.java:628)
at org.eclipse.help.internal.search.LocalSearchManager.ensureIndexUpdated(LocalSearchManager.java:602)
at org.eclipse.help.internal.search.federated.IndexerJob.run(IndexerJob.java:31)
at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)

!ENTRY org.eclipse.help.base 4 4 2014-07-18 14:43:04.708
!MESSAGE Help documentation could not be indexed completely.
!SUBENTRY 1 org.eclipse.help.base 4 4 2014-07-18 14:43:04.708
!MESSAGE Help document /org.eclipse.zest.doc.isv/guide/guide.html cannot be opened.
!SUBENTRY 1 org.eclipse.help.base 4 4 2014-07-18 14:43:04.708
!MESSAGE Exception occurred while adding document /org.eclipse.datatools.sqltools.doc.user/doc/html/asc1229700427574.html to ind
ex.
!STACK 0
org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Premature end of file.
at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.createSAXParseException(ErrorHandlerWrapper.java:198)
at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.fatalError(ErrorHandlerWrapper.java:177)
at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:441)
at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:368)
at com.sun.org.apache.xerces.internal.impl.XMLScanner.reportFatalError(XMLScanner.java:1436)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl$PrologDriver.next(XMLDocumentScannerImpl.java:1019)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(XMLDocumentScannerImpl.java:606)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(XMLDocumentFragmentScannerImpl.ja
va:510)
at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:848)
at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:777)
at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(XMLParser.java:141)
at com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.parse(AbstractSAXParser.java:1213)
at com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl$JAXPSAXParser.parse(SAXParserImpl.java:649)
at com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl.parse(SAXParserImpl.java:333)
at javax.xml.parsers.SAXParser.parse(SAXParser.java:195)
at org.eclipse.help.search.SearchParticipantXML.addDocument(SearchParticipantXML.java:298)
at org.eclipse.help.internal.search.HTMLSearchParticipant.addDocument(HTMLSearchParticipant.java:52)
at org.eclipse.help.internal.search.SearchIndex.addDocument(SearchIndex.java:231)
at org.eclipse.help.internal.search.IndexingOperation.addDocuments(IndexingOperation.java:252)
at org.eclipse.help.internal.search.IndexingOperation.addNewDocuments(IndexingOperation.java:159)
at org.eclipse.help.internal.search.IndexingOperation.execute(IndexingOperation.java:106)
at org.eclipse.help.internal.search.LocalSearchManager.updateIndex(LocalSearchManager.java:628)
at org.eclipse.help.internal.search.LocalSearchManager.ensureIndexUpdated(LocalSearchManager.java:602)
at org.eclipse.help.internal.search.federated.IndexerJob.run(IndexerJob.java:31)
at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)
!SUBENTRY 1 org.eclipse.help.base 4 4 2014-07-18 14:43:04.708
!MESSAGE Exception occurred while adding document /org.eclipse.jpt.doc.user/ref_details_orm.htm to index.
!STACK 0
org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Premature end of file.
at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.createSAXParseException(ErrorHandlerWrapper.java:198)
at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.fatalError(ErrorHandlerWrapper.java:177)
at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:441)
at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:368)
at com.sun.org.apache.xerces.internal.impl.XMLScanner.reportFatalError(XMLScanner.java:1436)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl$PrologDriver.next(XMLDocumentScannerImpl.java:1019)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(XMLDocumentScannerImpl.java:606)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(XMLDocumentFragmentScannerImpl.ja
va:510)
at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:848)
at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:777)
at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(XMLParser.java:141)
at com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.parse(AbstractSAXParser.java:1213)
at com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl$JAXPSAXParser.parse(SAXParserImpl.java:649)
at com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl.parse(SAXParserImpl.java:333)
at javax.xml.parsers.SAXParser.parse(SAXParser.java:195)
at org.eclipse.help.search.SearchParticipantXML.addDocument(SearchParticipantXML.java:298)
at org.eclipse.help.internal.search.HTMLSearchParticipant.addDocument(HTMLSearchParticipant.java:52)
at org.eclipse.help.internal.search.SearchIndex.addDocument(SearchIndex.java:231)
at org.eclipse.help.internal.search.IndexingOperation.addDocuments(IndexingOperation.java:252)
at org.eclipse.help.internal.search.IndexingOperation.addNewDocuments(IndexingOperation.java:159)
at org.eclipse.help.internal.search.IndexingOperation.execute(IndexingOperation.java:106)
at org.eclipse.help.internal.search.LocalSearchManager.updateIndex(LocalSearchManager.java:628)
at org.eclipse.help.internal.search.LocalSearchManager.ensureIndexUpdated(LocalSearchManager.java:602)
at org.eclipse.help.internal.search.federated.IndexerJob.run(IndexerJob.java:31)
at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54)