Description of problem:

When setting the timeout.reconciliation in the argocd-cm, the frequency in which an application syncs does not change from the default 3 minutes even when the repo server pod shows that the value is the expected one that was set. 

Issue in Argo CD upstream: https://github.com/argoproj/argo-cd/issues/11995 

Conversation on slack about this issue: https://redhat-internal.slack.com/archives/CMP95ST2N/p1680883835408519 

Prerequisites (if any, like setup, operators/versions):

Steps to Reproduce

1. start an argocd instance
2. set timeout.reconciliation: 1d in argocd-cm
3. {}restart every Deployment and the argocd-applicaton-controller.

Actual results:

1. look at the logs of the application controller and you will notice that the app still syncs every 3 minutes instead of the set value. 

Expected results:

1. The controller should sync every x set value instead of the default 3 minutes. 

Reproducibility (Always/Intermittent/Only Once):

Always

Acceptance criteria: 

• Review the PR
• Get the PR merged
• Get the changes into GitOps operator.

Definition of Done:

• Acceptance criteria is met. Code is submitted, tested, and merged.

Build Details:

According to issue thread on argocd github, the problem is happening as far back as v2.3

Additional info (Such as Logs, Screenshots, etc):