The spec is not exactly clear about the initial content of AnnotatedType.
When initially building the AnnotatedType (e.g. before handing it over to the Extensions) we need to pre-fill them with the info from the annotations from the classes.
Should this AnnotatedType:
1.) contain no annotations from superclasses?
2.) contain all annotations from superclasses?
3.) contain @Inherited annotations from superclasses?
I think the other questions already got cleared up in
Should AnnotatedType contain derived public? protected? private? methods/fields from a superclass?
Imo it should contain all information which would be available by manually parsing any annotations. In other words: it should be possible to completely modify or emulate annotations of a parsed type.